I got it up and running today finally!
I didn't manage to get the larger sprocket off, so I'm just running with the smaller sprocket for now (although the larger one does still run pretty well). I'm hoping that I can get a model b axel from Concept UK but they don't sell them online and they are not taking orders over the phone at the minute. Failing that I may angle grind it off but am scared of damaging the axle underneath.
I also jerry rigged the PM arm, thanks to johnlvs2run and Cyclist2 for the inspiration
One problem that plagued me once I get it back together was the two arms were pinching in on the ends of the axle and making it stick, especially on the return. So I added this block of wood to wedge them apart and it runs great now.
I dinged up the paint work pretty bad due the pinching of the arms and the tight fit so I still have some patching up to do. I'm also hoping to get the wood wedge and the PM arm machined in steel, I know there are places online that will do it but I'm not sure at what cost. If it's too much I will at least get these timber bits painted up.
Oh and I need a new chain guide, hoping that this is also something that I can order over the phone, but if not I might have a bash at getting one 3d printed.